Phylogenomic analyses of the Cucujiformia

The Cucujiformia, with remarkable morphological, ecological, and behavioral diversity, is the most evolutionarily successful group within Coleoptera. However, the phylogenetic relationships among superfamilies within Cucujiformia remain elusive. To address the issues, we conducted a transcriptome-based macro-evolutionary study of this lineage. We sequenced the genomes and transcriptomes of three species from the superfamily Curculionoidea (two from Curculionidae and one from Brentidae), and obtained a dataset of more than 569,990 amino acid alignments from 143 species of Cucujiformia. With the most complete collection of whole-genomes and transcriptomes so far, we compared the performance of different data matrices with universal-single-copy orthologs (USCO). The resultant trees based on different datasets were consistent for the majority of deep nodes. Two USCO amino acid matrices (i.e., USCO75 and USCO750-abs80) provided well-resolved topology. The analyses confirm that old Cucujoidea..., , , # Data from: Phylogenomic analyses of the Cucujiformia

[https://doi.org/10.5061/dryad.wh70rxww5](https://doi.org/10.5061/dryad.wh70rxww5)

The dataset includes original PCGs, supermatrices, and resultant files in the phylogenomic analyses of the Cucujiformia with transcriptome or genome data.Â