The MATLAB code and data for figures, tables, and results in the peer-reviewed paper "A deterministic model for understanding nonlinear viral dynamics in oysters" by Qubin Qin, Jian Shen, and Kimberly
aComparison of viral RNA half-lives in days from the indicated phases of RT-SHIV, SIV, or HIV-1 decay during HAART.bGroup one macaques with 95% CI.cGroup two macaques with 95% CI.dDinoso et al. [33].e
Estimates are given as geometric means including the range over all five patients. Parameters without an estimate (–) were assumed to be fixed during the fitting procedure. Intermediate values of the
Values of estimated individual parameters, , , , , features related to viral load, area under the curve, duration of infection, peak viral titer, time to peak viral titer, and daily viral load, calcul
