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Additional file 4 of A risk-associated Active transcriptome phenotype expressed by histologically normal human breast tissue and linked to a pro-tumorigenic adipocyte population

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https://figshare.com/articles/dataset/Additional_file_4_of_A_risk-associated_Active_transcriptome_phenotype_expressed_by_histologically_normal_human_breast_tissue_and_linked_to_a_pro-tumorigenic_adipocyte_population/12750456
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Additional file 4: Supplement Table 3. Rank ordered GSEA ( www.gsea-msigdb.org/gsea ) analysis showing 186 gene sets upregulated (from total set of 18,408 gene sets) in the batch-integrated Active vs. Inactive transcriptome samples, at FDR ≤ 10%. Also shown are their individual nominal p-values, FDR q-values, their gene set size, and the 21 (11.2%) that are specifically involved in adipose-associated pathways.
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2020-07-31
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