Accession numbers, mapping statistics, and matched RNA accession numbers for 99 Korean CRC whole-genome samples
收藏Figshare2025-12-10 更新2026-04-08 收录
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https://figshare.com/articles/dataset/Accession_numbers_mapping_statistics_and_matched_RNA_accession_numbers_for_99_Korean_CRC_whole-genome_samples/30845570/1
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资源简介:
We performed whole-genome sequencing (WGS) on 99 Korean patients with early- and late-onset colorectal cancer (CRC). <b>This dataset provides the accession numbers, mapping statistics, and matched RNA accession numbers for the deposited whole-genome data of these 99 patients.</b><b> </b>The abstract of our paper is as follows: Colorectal cancer (CRC) is the third most prevalent cancer type worldwide. Despite improvements in screening programs, the incidence of early-onset CRC (EOCRC) in patients under 50 years old is rapidly increasing, including in Korea, in contrast to the decreasing trend of late-onset CRC (LOCRC). However, a comprehensive biological understanding of CRC’s coding and non-coding variants, onset-dependent prognostic variables, and the genetic and transcriptomic differences between EOCRC and LOCRC remains limited. To provide insights into this, we present a high-quality multi-omics dataset consisting of whole genome sequencing (WGS) and RNA sequencing (RNA-seq) data from 49 EOCRC and 50 LOCRC patients. WGS was performed using the DNBSEQ-T7 platform, generating 1.409 billion reads at an average depth of 37.70×. RNA-seq data previously generated from the same samples are included to support integrative analysis. This dataset enables comprehensive exploration of genomic and transcriptomic alterations in CRC and serves as a valuable resource for identifying onset-specific biomarkers and molecular features, ultimately supporting improved diagnosis and therapeutic strategies.
提供机构:
Sik Yoon, Yong; Tak, Ka Hee; Lee, Sun-Woo; Jin Ha, Ye; Lyul Lee, Jong; Park, Seung-Jin; Oh, Seung-Eun; Kim, Seon-Yeop; Park, Jong-Lyul; Kim, Seon-Young; Kim, Chan Wook; Kim, Jae-Yoon
创建时间:
2025-12-10



