Additional file 3: of Comprehensive evaluation of structural variation detection algorithms for whole genome sequencing

Table S5. Recall and precision of SV-calling results with the simulated data (Sim-A, Sim-MEI, Sim-NUMT, Sim-VEI). Table S6. Recall and precision of SV-calling results with the real data (NA12978 data1 or PacBio-data1). Table S7. Recall and precision of SV-calling results with the real data (NA12978 data2 or PacBio-data2). Table S8. Recall and precision of SV-calling results with the real data (NA12978 data3 or PacBio-data3). Table S9. Recall and precision of SV-calling results with the real data (NA12978 data4 or PacBio-HG002). Table S10. SV calling results (recall, precision, Mendelian inheritance error, mean, and standard error) obtained with the four (or three) NA12878 real datasets. (including the numerical data of Fig. 3 and Additional file 1: Figures S3â S5). Table S11. Recall and precision of SV-calling results with the HG00514 real data. Table S14. Root mean squared errors of breakpoints (BPs) and lengths of called SVs for SV detection algorithms. Table S16. Recall and precision of SVs commonly called between a pair of SV detection algorithms with the simulated and the NA12878 real datasets. Table S17. Mean precision and recall of overlapped calls for each algorithm and for each SV category. Table S18. Fold change of precision and recall of overlapped calls between algorithm pair for the four (or three) sets of NA12878 real data. (XLSX 1162 kb)