Data, Results and tools code for Seed2LP paper reproducibility
收藏Recherche Data Gouv France2024-01-01 更新2026-04-09 收录
下载链接：
https://entrepot.recherche.data.gouv.fr/citation?persistentId=doi:10.57745/OS1JND
下载链接
链接失效反馈官方服务：
资源简介：
These data repository is a tar.gz containing: Data: sbml files retrieved from BiGG database, some specific data such as objectives reaction or targeted metabolites from objective reaction, sbml normalised file after Seed2LP normalisation Results: all results obtains from the benchmark to get the data visualisation and analyses used on the Paper Seed2LP. Additional results have been produced in v2 of datasets. Tools: 3 tools needed to compute the results Precursor (https://github.com/bioasp/precursor, licence GNU GPL V3) N2PComp (which integrate NetSeedPerl and run both Precursor and Netseed. Netseed has the licence licence GNU GPL V3 and originates from publication 10.1093/bioinformatics/btr721 Seed2LP This repo does not contain the notebooks to execute the run in order to get the results, or to visualise data. These notebooks are available on github : https://github.com/bioasp/seed2lp
提供机构：
)
创建时间：
2024-01-01
