Cell and gene data for testicular single-cell RNA-Seq

Tables containing additional information on genes and cell obtained from single-cell RNA-Seq analysis of mouse testis data. <br>SuppTableCells.xlsx contains the 10X Barcode as identifier, the replicate ID, position in the t-SNE plot, UMI and gene count per cell, the proportion of mitochondrial transcripts, cluster ID obtained by k-Means clustering (k=9), inferred cell type, and pseudotime information obtained using monocle and Scrat.<br>SuppTableGenes contains the average expression value, fold-change compared to other cell types, and p-value relative to other cell types for each gene that was expressed in the dataset. Throughout the data, the following abbreviations for cell types are used: Spg=spermatogonia, SC=spermatocytes, RS=round spermatids, ES=elongating spermatids, CS=condensed/condensing spermatids. In cases where several clusters were identified per cell type, the earlier cluster was designated as 1.<br>