Table 3 in Complex geohistory of continental islands advanced allopatric evolution even for the highly dispersive generalist red fox % Vulpes vulpes): multiple phylogenetic groups in the Japanese Archipelago

Table 3. Genetic diversity of the two red fox subspecies in the Japanese Archipelago* based on the mtDNA cytb gene and D-loop region. The number of individuals N * sequence length* number of haplotypes H * number of substitution sites S (of which the number of transversion mutations v)* number of gaps G * haplotype diversity H d * and nucleotide diversity π are shown for the Hondo and Kita red fox populations. Population (N)SequenceLength (bp)HS (v)GH dπHondo (126)Combined15102125 (1)20.92 ± 0.010.0038 ± 0.0020cytb11401316 (0)00.84 ± 0.020.0030 ± 0.0017D-loop370129 (1)20.84 ± 0.020.0062 ± 0.0038Kita (56)Combined15091760 (3)30.86 ± 0.030.0102 ± 0.0051cytb11401139 (3)00.79 ± 0.040.0074 ± 0.0039D-loop3691221 (0)30.71 ± 0.060.0189 ± 0.0100