MOESM4 of Coincidence cloning recovery of Brucella melitensis RNA from goat tissues: advancing the in vivo analysis of pathogen gene expression in brucellosis

Additional file 4. Gene expression values for short- and long-term goat samples. Annotated probe table prepared for coincidence cloning samples for goats 1â 3 (short-term) and goats 4â 7 (long-term) using SeqMonk. Libraries were treated as paired-end upon loading into SeqMonk. Quantitation was performed using the RNA-Sequencing pipeline in SeqMonk, using the option for normalization of values to gene size (per kilobase of transcript per million mapped reads, or FPKM, based on SeqMonk documentation), and expression values are expressed as log2 transformations of FPKM values. Start and end columns indicate locations of each quantitated feature in the B. melitensis 16M reference genome.