LC-MS/MS data obtained from phosphoproteome preps of wild type (TgPPM3C-HA) and ΔTgPPM3C cultures.

Data are presented in six different tabs. The “Ranked Parasite Phosphopeptide” tab summarizes the average fold change (ΔTgPPM3C/Wild Type) and -log2 p-values from a ranked list of all detected parasite phosphopeptides and also includes the specific phosphomodifications, short names, and whether a differentially regulated phosphopeptide belongs to a protein known to be secreted into the parasitophorous vacuole lumen. The “TiO2 Flow Through Analysis”, “TiO2 Phosphopeptide Analysis”, and “Fold Change Analysis” tabs demonstrate data transformation steps and equations used to determine average normalized phosphopeptide fold enrichments and p-values. Information on search engine identification quality parameters (e.g. PEP scores, Percolator q-values, etc.) are provided in the “TiO2 Flow Through Raw Data” and “TiO2 Enriched Peptide Raw Data” tabs. This dataset has been deposited into the mass spectrometry open access repository Chorus under Project ID 1695 and onto ToxoDB (EuPathDB). (XLSX)