Canis familiaris (Dog Mar. 2020 UU_Cfam_GSD_1.0)

High confidence set 593 tRNAs decoding standard 20 AA 592 Selenocysteine tRNAs (TCA) 1 Notable atypical predictions Anticodon/isotype mismatch 25 Unexpected anticodons 2 Non-canonical anticodon loop length 3 Other tRNA-like predictions Primary filter (tRNAscan-SE pseudogenes) 150176 Secondary filter (low feature scores, possible rep. element) 3238 Tertiary filter (excessive isotype copies, possible rep. element) 50 Arg TCT 4 Leu CAA 4 Ile TAT 5 Tyr GTA 9 Isotype tRNA Count by Anticodon Total Ala AGC 12 GGC CGC 4 TGC 9 25 Gly ACC GCC 51 CCC 5 TCC 53 109 Pro AGG 8 GGG CGG 4 TGG 6 18 Thr AGT 8 GGT CGT 4 TGT 6 18 Val AAC 6 GAC CAC 10 TAC 5 21 Isotype tRNA Count by Anticodon Total Ser AGA 10 GGA CGA 4 TGA 4 ACT GCT 8 26 Arg ACG 6 GCG CCG 3 TCG 5 CCT 8 TCT 5 27 Leu AAG 5 GAG CAG 51 TAG 4 CAA 4 TAA 4 68 Isotype tRNA Count by Anticodon Total Phe AAA GAA 10 10 Asn ATT GTT 21 21 Lys CTT 38 TTT 10 48 Asp ATC GTC 45 45 Glu CTC 50 TTC 17 67 His ATG GTG 8 8 Gln CTG 11 TTG 4 15 Isotype tRNA Count by Anticodon Total Ile AAT 8 GAT CAT TAT 5 13 iMet/Met CAT 9/9 18 Tyr ATA GTA 9 9 Supres TCA CTA TTA 0 Cys ACA GCA 19 19 Trp CCA 7 7 SelCys TCA 1 1