Top 0.1% SNPs by FST values during pair-wise comparison of breeds.

Note: BTA, Bos taurus autosome; breed: YRSL, Yaroslavl; KHLM, Kholmogor; HOL, Holsteins; compared pairs of breeds indicated by different colour filling: KHLM/HOL, blue filling; YRSL/HOL, green filling; KHLM/YRSL, pink filling; SNP, SNPs selected in top 0.1% for each pair of breeds; POS, position of SNPs according to Bos_taurus_UMD_3.1.1 genome assembly (https://www.ncbi.nlm.nih.gov/assembly/GCF_000003055.6); NMISS, number of missing SNPs; FST, FST value calculated for each SNP during pair-wise breed comparison; genes, genes within which or close (within window from 0.2 Mbp up-stream to 0.2 Mbp down-stream of the causal SNP) to which is localised the causal SNP; the candidate genes within which the causal SNPs are localised are indicted in bold. (XLSX)