Comparison of TEREE to other computational T3SS substrate prediction models.
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aValues were calculated by dividing the number of validated effectors, or true positives, by the sum of the true positives and false negatives. The second columns of Tables S3, S4, and S5 list the validated effectors for P. s. phaseolicola 1448a, S. e. Typhimurium LT2, and R. solanacearum GMI1000, respectively.bValues were calculated by dividing the number of true negatives (non-substrates of the T3SS) by the sum of the false positives and true negatives.cThe sensitivity and specificity values for SIEVE and BPBAc were calculated based on published data sets [38], [43].
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2015-12-02
