Genes found in both RNA-Seq and RIP-Seq, sorted alphabetically.
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https://figshare.com/articles/dataset/_Genes_found_in_both_RNA_Seq_and_RIP_Seq_sorted_alphabetically_/1479346
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*Denotes the nearest annotated gene to the discovered binding site, rather than an overlapping annotated gene.
The seven protein-coding genes identified as significant based on RIP-Seq and RNA-Seq are given. For RIP-Seq, the total number of significant ‘hits’ (binding events) per gene are reported, counted across two independent RIP experiments. Fold denotes the minimum fold change observed across all of the hits, where fold change is expressed as (HuR/IgG), and q denotes the maximum q-value (false discovery rate value based on method of Benjamini-Hochberg) from testing for HuR binding to RNA. Location of binding overlaps the annotated gene unless otherwise noted. For RNA-Seq, fold denotes change (HuR KO/CTL).
创建时间:
2015-07-10



