Manduca sexta Official Gene Set v2.2

Manduca sexta, known as the tobacco hornworm or Carolina sphinx moth, is a lepidopteran insect that is used extensively as a model system for research in insect biochemistry, physiology, neurobiology, development, and immunity. One important benefit of this species as an experimental model is its extremely large size, reaching more than 10 g in the larval stage. M. sexta larvae feed on solanaceous plants and thus must tolerate a substantial challenge from plant allelochemicals, including nicotine.
This dataset presents the Manduca sexta Official Gene Set (OGS) v2.2. It is derived from Official Gene Sets OGSv2.0 and OGSv2.1. OGSv2.0 was modified to meet NCBI-GenBank quality review, resulting in OGSv2.1. This was deposited in NCBI GenBank (accession number AIXA00000000). OGS2.1 was lifted over to assembly JHU_Msex_v1.0/GCF_014839805.1 using the LiftOff (https://doi.org/10.1093/bioinformatics/btaa1016) and Genometools (http://genometools.org/) software, resulting in OGSv2.2. OGSv2.2 has quality issues due to the liftover - the i5k Workspace@NAL recommends NCBI Annotation Release 102 for general analysis, instead. Resources in this dataset:Resource Title: Manduca sexta Official Gene Set v2.2. File Name: OGSv2.2.tar.gzResource Description: The attached tar.gz archive (OGSv2.2.tar.gz) contains the following files:
mansex_OGSv2.2.gff. Gff3 file of all gene predictions of Manduca sexta genome annotations OGSv2.2
readme.txt. A readme describing the OGS generation process.

曼氏六斑粉蝶，亦称烟草角worm或卡罗来纳夜蛾，是一种广泛用于昆虫生化、生理学、神经生物学、发育和免疫学研究模型的鳞翅目昆虫。该物种作为实验模型的显著优势在于其体型极为庞大，在幼虫阶段体重可超过10克。M. sexta幼虫以茄科植物为食，因此必须耐受来自植物次生代谢物的巨大挑战，包括尼古丁。本数据集展示了曼氏六斑粉蝶官方基因集（OGS）v2.2版本。该版本源自OGSv2.0和OGSv2.1。OGSv2.0经过修改以满足NCBI-GenBank质量审查标准，从而产生OGSv2.1。该版本已存入NCBI GenBank（登录号AIXA00000000）。OGS2.1通过LiftOff（https://doi.org/10.1093/bioinformatics/btaa1016）和Genometools（http://genometools.org/）软件转换至组装JHU_Msex_v1.0/GCF_014839805.1，从而形成OGSv2.2。由于转换过程中存在质量问题，i5k Workspace@NAL建议使用NCBI注释发布版102进行一般分析。本数据集包含以下资源：
资源标题：曼氏六斑粉蝶官方基因集v2.2。
文件名：OGSv2.2.tar.gz。
资源描述：附带的tar.gz压缩文件（OGSv2.2.tar.gz）包含以下文件：
mansex_OGSv2.2.gff。曼氏六斑粉蝶基因组注释中所有基因预测的Gff3文件。
readme.txt。描述OGS生成过程的readme文件。

搜集汇总

背景与挑战

背景概述

该数据集提供了烟草天蛾（Manduca sexta）的官方基因集v2.2版本，适用于昆虫多领域研究，包含基因预测文件和生成过程说明，但建议使用更稳定的NCBI Annotation Release 102进行一般分析。