IgH targeted reads from CD138+ plasma cells using the Ion S5, MiSeq, and Oxford Nanopore sequencing platforms
收藏DataCite Commons2023-08-25 更新2024-08-18 收录
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https://figshare.com/articles/dataset/Reads_from_sequencing_of_diagnostic_sample_CD138_cells_using_Ion_S5_platform/24032322
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Gzipped fastq file of reads from sequencing of CD138+ plasma cells (multiple myeloma) using Ion S5, MiSeq, and Nanopore platforms. The patient sample has been characterized in a previous paper (pt. 1):Cédile O, Hansen MH, Dahlmann SK, Kristensen TK, Abildgaard N, Nyvold CG. Reproducibility of low-level residual myeloma immunoglobulin detection using ultra-deep sequencing. Exp Hematol. 2023 Mar-Apr;119-120:14-20. doi: 10.1016/j.exphem.2023.01.002. Epub 2023 Jan 25. PMID: 36708872.The Oxford Nanopore reads are converted to fastq-like format, where only the sequences have been preserved but is compatible with the swigh-score analysis tools. This tool can be downloaded from http://github.com/marcus-hoy-hansen/swigh-score and has been tested on Ubuntu version 18 to 22.
提供机构:
figshare
创建时间:
2023-08-25



