<b>Demographic inference provide evidence of Quaternary-driven impact on the cactus moth and shed light of the role of an exotic host</b>

File Name: <code><strong>CcactorumFiltered.vcf</strong></code>File Type: Variant Call Format (VCF)Purpose: This VCF file contains Single Nucleotide Polymorphisms (SNPs) identified in a genomic analysis of 61 samples of <i>C. </i><i>cactorum</i>. These SNPs have undergone a series of filtering steps as part of the analysis to ensure data quality and reliability.File Name: <code><strong>CcactorumNoFilters.vcf</strong></code>File Type: Variant Call Format (VCF)Purpose: This VCF file contains Single Nucleotide Polymorphisms (SNPs) obtained from an <i>ipyrad</i> assembly of genomic data for <i>C. cactorum</i>. Importantly, this file contains SNPs without any filtering or quality control steps applied. It represents the raw output of the assembly process and includes all identified variants.File Name: <code><strong>CcactorumSFS.vcf</strong></code>File Type: Variant Call Format (VCF)Purpose: This VCF file contains Single Nucleotide Polymorphisms (SNPs) from a subset of individuals specifically selected to build the Site Frequency Spectra (SFS). The SFS represents the distribution of allele frequencies within the sampled population.Dependencies:The script provided by Isaac Overcast, available at GitHub (https://github.com/isaacovercast/easySFS), was used to build the SFS from this VCF fileFolder Name: <code><strong>Fastsimcoal_</strong></code><code><strong>DemographicModels.zip</strong></code>Contents: This ZIP folder contains a comprehensive set of input files used for demographic analyses using FASTSIMCOAL2. The files include <code>.tpl</code> (template files), <code>.est</code> (estimation files), and site frequency spectra of each group.Folder Name: <code><strong>StairwayPlot_DemographicInference.zip</strong></code>Contents: This ZIP folder contains input files, Stairway Plot templates, and results of demographic inference for each group analyzed in this study.The GitHub repository https://github.com/niconm89/pipeFSC contains a demographic simulation automation pipeline developed for this study.