Supporting data for "COMPOSITION AND METABOLIC POTENTIAL OF MICROBIAL COMMUNTIES FROM MARINE PLASTIC BIOFILMS"
收藏datahub.hku.hk2023-03-21 更新2025-01-16 收录
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https://datahub.hku.hk/articles/dataset/Supporting_data_for_COMPOSITION_AND_METABOLIC_POTENTIAL_OF_MICROBIAL_COMMUNTIES_FROM_MARINE_PLASTIC_BIOFILMS_/22183828/1
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These are OTU tables generated from seawater and plastic biofilm samples in Hong Kong. Read counts are provided. OTUs generated from the DNA sequences are classified to the phylum, class, order, family, genus and species level with SILVA and GTDB. Analysis was done with QIIME2. Files are in .xlsx format, easily readable.
Includes sequence data from metagenomic analysis of the seawater and plastic biofilm samples. Data was submitted to the SRA database. BioProject accession number is PRJNA922935. Data will be released 2024-02-01.
本数据集由香港海域及塑料生物膜样本生成的操作分类单元(OTU)表格构成。其中包含序列读取计数。通过DNA序列生成的OTU已根据SILVA和GTDB数据库进行分类,直至门、纲、目、科、属和种级别。分析过程采用QIIME2工具进行。数据文件格式为.xlsx,便于阅读。数据集还包含了对海域及塑料生物膜样本进行宏基因组分析得到的序列数据。相关数据已提交至SRA数据库,BioProject访问号为PRJNA922935。数据将于2024年2月1日发布。
提供机构:
HKU Data Repository



