Additional file 15: of Transcriptome sequencing of Mycosphaerella fijiensis during association with Musa acuminata reveals candidate pathogenicity genes
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Table S9. Homologs of genes on scaffolds 15 and 21 of the M. fijiensis genome. For each gene on scaffolds 15 and 21, a blastp search was done using the NCBI non-redundant protein sequence database to identify conserved domains and the best 10 homologs by bitscore for each sequence. For each M. fijiensis sequence of interest, the table includes the JGI protein and gene IDs, a link to the NCBI accession, the location of the gene on each scaffold and a link to the genome browser, the log2 fold change (log2FC), the p-value for differential expression adjusted for multiple testing (adjusted p-value), GO, Interpro, and KOG annotations from JGI, conserved domains identified using NCBIâs Conserved Domain Database, and a summary of blastp results using the NCBI nr protein sequence database: species where the homolog was found, a description of the homolog, the bitscore, the E-value, the percent identity and similarity, and a link to the NCBI accession. Genes with higher expression in infected leaf tissue are colored in green. (XLS 235Â kb)
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2016-12-14



