Data from: Repairing a deleterious domestication variant in a floral regulator of tomato by base editing

This repository contains the data necessary to run the analysis described in the publication "Repairing a deleterious domestication variant in a floral regulator of tomato by base editing" by Glaus et al., 2024. A preprint is available on bioRxiv (doi: https://doi.org/10.1101/2024.01.29.577624)

82_acc_Spim0.1_filtered.vcf.gz -- variant call results for 82 genomes with LA1589 as reference

82_acc_Spim0.1_filtered_SIFT_out.tar.gz -- sift4g prediction results for 82 genomes with LA1589 as reference (SIFTannotations.xls and SIFTpredictions.list)

sift_lib_LA1589.tar.gz -- sift4g library for the LA1589 genome

SolpimLA1589_liftoff.tar.gz -- liftoff annotation of LA1589 genome

In case of any questions, please contact Sebastian Soyk ([e-mail])