Iodoform Arrested Anaerobic Digestion Metagenome Supporting information

taxonomy_silva.tsv contains taxonomy assignments for all representative 16S rRNA gene amplicon sequence variants using the SILVA database v132. taxonomy_greengenes.tsv contains taxonomy assignments for all representative 16S rRNA gene amplicon sequence variants using the Greengenes database. 1_16S_rep_seqs.fasta contains all representative 16S rRNA gene amplicon sequence variants. 2_16S_reads_table.tsv contains the read counts (abundances) of 16S rRNA gene sequences assigned to each representative sequence per sample. 16S_master.table.clean.csv contains comprehensive information on 16S rRNA gene relative abundances, taxonomy, and representative sequences. 4_metagenome_gene_database-annotated.xlsx contains annotated genes, gene abundances per sample, and gene descriptions based on KEGG database gene IDs and descriptions. 4_heatmap_metagenome_gene_database-annotated.xlsx includes annotated gene IDs and descriptions, normalized gene abundances displayed as both values and heatmaps, and statistical abundance analyses performed using MaAsLin2. metadata.txt contains relevant metadata associated with each collected sample. Maaslin2_output_treatment_gene_ID.zip statistical abundance analyses at the gene level performed using MaAsLin2 - output files (all timepoints n=8). Maaslin2_output_module_trt_end.zip tatistical abundance analyses at the module level performed using MaAsLin2 - output files (two last timepoints n=4).