Additional file 2: Table S1. of Circulating cell-free DNA-based epigenetic assay can detect early breast cancer

Characteristics of cell lines used in this study. Table S2. Characteristics of FFPE samples used in methylation array analysis. Table S3. Characteristics of healthy volunteers in methylation array analysis. Table S4. Primer/probe set designed for methylation markers. Table S5. Sequence of primer/probe sets for methylation markers. Table S6. Sequence of primer/probe sets of internal control markers. Table S7. Clinical data of cfDNA samples and results of ddMSP analysis. Table S8. Sensitivity and specificity of the best SVM model. Table S9. Correlation between age and each marker/parameter. Table S10. Summary of recent epigenetic studies regarding cfDNA for BC. Table S11. Upper and lower cutoff threshold of positive droplets. Table S12. Cutoffs of marker concentration to categorize into marker-positive/negative groups. Table S13. P values of statistical tests in the validation analysis using public datasets. (XLSX 172 kb)