Filtered_RADseq_datasets_crested_porcupine

This file contains three datasets of African porcupines (*Hystrix cristata* and *H. africaeaustralis*) samples as presented in the paper "Long live the alien: is high genetic diversity a pivotal aspect of crested porcupine (*Hystrix cristata*) long-lasting and successful invasion?" doi: 10.1111/mec.13698. Data were produced by single-digestion RAD sequencing using SbfI as restriction enzyme and analyzed in Stacks (Catchen et al. 2013) using denovo_map.pl. Catalogs of RAD loci were exported using export_sql.pl script in the Stacks package and further filtered using the custom python script “loci_selector.py” released as Supplementary Material in the above mentioned publication.