Additional file 2 of Sequential host-bacteria and bacteria-bacteria interactions determine the microbiome establishment of Nematostella vectensis

Additional file 2: Table S1. Bacterial strains isolated from Nematostella vectensis with phylogeny according to GenBank Accession number, and ASV names. Table S2. Clusters with the genomes (self-sequenced or downloaded from the ncbi database) which were used for the metabolic potential analysis. Table S3. Count table for the ASVs for the recolonization of polyps and tubes. Table S4. Taxonomy of the ASVs. Table S5. Pairwise Permanova on the Bray–Curtis distances for the recolonization of polyps. Table S6. Pairwise Permanova on the Bray–Curtis distances for the recolonization of tubes. Table S7. ASVs with shortened ASV number and 97% cluster to which they belong. Table S8. Bacterial strains from which genomes were sequenced, with developmental stage from which they were isolated, phylogeny and ncbi classification. Table S9. Pathways contributing the most to the separation on dimension 1 in the PCA showing the metabolic capabilities during recolonization (Fig. 4A). Table S10. Up- and downregulated genes upon recolonization with bacteria, independent of the inoculum (bL-bJ-bA vs GF). Table S11. Top20 upregulated genes upon recolonization with bacteria, independent of the inoculum. All relevant scripts can be found on GitHub under https://github.com/Porthmeus/DominEtAl_NematostellaRecolonization and https://github.com/ikmb/assembly-bacteria