Additional file 1 of Gene losses, parallel evolution and heightened expression confer adaptations to dedicated cleaning behaviour

Additional file 1: Table S1. Metrics for Labroides dimidiatus assembly. Table S2. The length and number of coding genes in Labroides dimidiatus genome. Table S3. BUSCO results (The lineage dataset is: actinopterygii_odb9) using predicted genes in genome of each species as input. Table S4. Percentage of different category of repeat elements in Labroides dimidiatus genome. Table S5. Dynamics of Gene family size of Labroides dimidiatus. Table S6. The number of predicted intact olfactory receptor (OR) in all of 14 species in our study. Table S7. The number of glutamate receptors identified among eight Labridae fishes. Table S8. Positively selected genes (41 genes) of Labroides dimidiatus detected by both PAML and HYPHY. Table S9. Noise Estimated by Simulations—Number of sites of random/false convergence. Table S10. Genes with convergent substitutions in dedicated cleaner (Labroides dimidiatus) and facultative cleaners (Symphodus melops, Semicossyphus pulcher, Tautogolabrus adspersus, Thalassoma bifasciatum, Labrus bergylta). Table S11. Differentially expressed genes (DEGs) between non-interaction (solo) and interaction (inte) groups of Labroides dimidiatus. Table S12. GO enrichment of all 4,004 differentially expressed genes (DEGs) between non-interaction (solo) and interaction (inte) groups of Labroides dimidiatus. Table S13. Genes related to social behavior of differentially expressed genes (DEGs) between non-interaction (solo) and interaction (inte) groups of Labroides dimidiatus. Table S14. Differentially expressed glutamate receptors and glutamate receptor-interacting proteins (from top to bottom in heatmap) between non-interaction (solo) and interaction (inte) groups of Labroides dimidiatus. Table S15. The sequences of 12S, 16S and COI used in the construction of phylogenetic tree to confirm the species of the sampled Labroides dimidiatus individual.