Ryp3 ChIP enrichment in response to Entinostat.

Excel-compatible tab-delimited text conforming to JavaTreeView extended CDT format. Each row represents a unique gene to peak association as given in the UNIQID column. The NAME column gives short names taken from S1 Data of [86] with additional names and corrections based on human curation. Description and HcG217B_pred (WUSTL G217B predicted gene accessions), HcG217B_rc (Edwards and colleagues G217B transcript accessions [11]), HcG217B_acc (UCSF1 gene accessions [86]), and HcG217B (Gilmore and colleagues 2015 transcript accessions [18]); and Ryp1_ChIP, Ryp2_ChIP, Ryp3_ChIP, and Ryp4_ChIP (indicating genes with promoters bound by Ryp TFs in [17]) are taken from S1 Data of [86]. Following a GWEIGHT column, included for JavaTreeView compatibility, is ChIP enrichment for each sample followed by mean enrichment over all samples (A) and differential enrichment (DMSO/Ent50), with all enrichment values on a log2 scale. (S9_Table.TXT)