Optimized Geometries for Enabling Next Generation Enzyme Mimics Through Local Electric Field Control in Organic Cage Catalysts
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This dataset contains geometry files (.xyz) used to investigate the effects of external, local, and solvent-screened electric fields on molecular cages and their reactivity. It includes optimized structures of 18 distinct cage molecules, geometries of cage 1 under a range of external electric fields, and structures of selected cages reoptimized under implicit solvent conditions. All files are provided in standard .xyz format and are organized as follows: 1. 1ac1_1/ — Substituted Cages (No Field) This folder contains .xyz files labeled 1.xyz through 14.xyz, each representing a different substituted molecular cage with an anhydride moiety inside the cage. All structures are optimized in the absence of external electric fields. 2. explicit_field/ — Cage 1 Under Uniform Electric Fields This folder contains geometries of cage 1 optimized under externally applied uniform electric fields of varying strengths and directions (measured in volts per ångström, V/Å). It includes two subdirectories: opt-TS/: Optimized transition state (TS) geometries of cage 1 under electric fields ranging from –0.25 V/Å to +0.35 V/Å. six_in_1ac1_1/: Optimized reactant complex geometries of cage 1 under the same range of electric fields. 3. local_field/ — Cages 1–18 Under Local Electric Fields This folder includes optimized geometries of all 18 substituted cages under local (non-uniform) electric field conditions. It contains two subdirectories: opt-TS/: Optimized transition state geometries for cages 1–18 (1.xyz to 18.xyz) under local fields. six_in_1ac1_1/: Corresponding reactant complex geometries under local field conditions, also for cages 1–18. implicit_solvent_opt/:— New: Optimized geometries of selected cages (2, 3, 4, 13, and 14) using an implicit solvent model. This folder includes the same two subdirectories: opt-TS/: Optimized transition state geometries. six_in_1ac1_1/: Reactant complex geometries.



