Additional file 2 of 5’isomiR-183-5p|+2 elicits tumor suppressor activity in a negative feedback loop with E2F1

Additional file 2 : Supplementary Table 1. miRNA mimics and siRNAs. Supplementary Table 2. Cloning Primers. Supplementary Table 3. qPCR Primers and Probes. Supplementary Table 4. Antibodies. Supplementary Table 5. Luciferase Assay Buffers. Supplementary Table 6. isomiR Differential Expression Analysis. Supplementary Table 7. pre-miR-183 overexpression levels in stable cell lines. Supplementary Table 8. Statistical Analysis of Fig. 3d-f. Supplementary Table 9. MassSpec Raw Data (LFQ, non-imputed). Supplementary Table 10. MassSpec ranked expression files used for GSEA. Supplementary Table 11. GSEA results comparing protein expression between isomiRs and controls and using the MSigDB Hallmark gene set collection. Supplementary Table 12. Z-scores of LFQ intensities for the E2F1 targets (heatmap, Fig. 4c). Supplementary Table 13. Results of Fisher's exact test. Supplementary Table 14. Target Prediction results. Supplementary Table 15. TCGA-BRCA and METABRIC mRNA and miRNA expression data and activation scores for selected genes and miRs. Supplementary Table 16. GSEA results comparing gene expression from TCGA and METABRIC patient data based on expression of isomiRs of miR-183-5p of miR-183-5p in METABRIC.