Files for Main Figure 5

Files for generating main figure 5 1. intergenic_TE_gene_5kb: Correlation results between intergenic TEs and +/- 5kb genes 2. TCGA_COAD_four_endpoint_survival: Survival data in four endpoints for TCGA-COAD patients 3: TCGA_COAD_gene: Gene TPM expression for TCGA-COAD patients 4: trinucleotide_mutational_profile: Summary of mutational profile in trinucleotide context in TCGA-COAD patients 5. Sensing_gene_TE_cor_GSVA_lasTEq: Correlation results between DNA-RNA sensing genes and TE quantified by lasTEq 6. Sensing_gene_TE_cor_GSVA_telescope: Correlation results between DNA-RNA sensing genes and TE quantified by telescope 7. GSVA_TCGA_COAD_sensing_gene: GSVA scores calculated for DNA-RNA sensing genes 8. 3_UTR: locations of 3'UTR of genes 9. 5_UTR: locations of 5'UTR of genes 10: TCGA_COAD_TE_exp_lasTEq: TE TPM expression of full TCGA-COAD cohort using lasTEq