Replication Data for: MEA-NAP compares microscale functional connectivity, topology, and network dynamics in organoid or monolayer neuronal cultures

This collection includes MATLAB-based code, microelectrode array (MEA) data, and other resources to assist users with our computational tool, the MEA network analysis pipeline (MEA-NAP). <br> <br>

** Dataverse contents: ** <br><br>

1. MEA-NAP.zip - The MATLAB-based code for MEA-NAP version 1.6.0 that was used for the analysis in Sit et al. (2024) Cell Reports Methods. MEA-NAP version 1.10.0 is also included, which was the latest version at the time of publication of Sit et al. (2024). For the most up-to-date version, please see https://github.com/SAND-Lab/MEA-NAP/ <br><br>
2. MEA-NAP GUI Tutorial.mp4 - This tutorial related to MEA-NAP versions 1.6 and 1.7. A detailed video guide to using MEA-NAP for new users. Please see our Github for links to video updates on MEA-NAP on our Synaptic and Network Development (SAND) YouTube channel.<br><br>
3. NGN2_20230208_Data - MEA recordings from NGN2 neuronal cultures and batch analysis file. This data relates to Figure 3 in Sit et al. (2024). These are example inputs to MEA-NAP. <br><br>
4. NGN2_20230208_OutputData - The full output folder including Steps 1-5 is zipped to preserve the folder organization. Outputs from Steps 1 and 2 are available for download as individual files. <br><br>
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