相关数据集
Base pair distance between the sampled and native structures for cis -regulatory elements from Hepatitis C virus and HIV
Native structure is here taken as the Rfam consensus structure from the seed alignments of these elements of HCV and HIV. Two measures are given. The average distance represents the average base pair
NIAID Data Ecosystem60
Secondary Structure of a Conserved Domain in the Intron of Influenza A NS1 mRNA
Influenza A virus is a segmented single-stranded (−)RNA virus that causes substantial annual morbidity and mortality. The transcriptome of influenza A is predicted to have extensive RNA secondary stru
NIAID Data Ecosystem20
Heuristic for Maximizing DNA Reuse in Synthetic DNA Library Assembly
De novo DNA synthesis is in need of new ideas for increasing production rate and reducing cost. DNA reuse in combinatorial library construction is one such idea. Here, we describe an algorithm for pla
Figshare2016-02-17 更新10
Benchmark of 5S, 16S and 23S rRNA Secondary Structures
Benchmark of 5S, 16S, 23S rRNA secondary structures taken from the CRW database https://crw-site.chemistry.gatech.edu/ Each molecule is available in bpseq, ct and dot-bracket-letter (db) format.
Figshare2022-08-30 更新40
multimolecule/ipknot_plus_plus
IPknot++是一个用于RNA二级结构预测的基准数据集，随IPknot++论文发布。该数据集旨在作为外部评估集，而非训练分割，通常用于在SPOT-RNA风格的分割（如bpRNA-spot）上训练或调优RNA二级结构预测模型后，评估模型的泛化能力。原始发布未定义训练和验证分区，因此每个变体都作为单一的测试分割发布。数据集包含三个变体：1) ipknot_plus_plus：单序列结构，无多序列对齐
Hugging Face2026-06-09 更新20
