遇见数据集

Subset BAM Files for Atf4 Locus (chr15:79,481,845–81,029,726) from RNA-seq

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Zenodo2025-07-28 更新2026-05-26 收录
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This dataset contains subset BAM files corresponding to the genomic interval chr15:79,481,845–81,029,726 (mm10), which includes the Atf4, Rps19bp1, Cacna1i loci and others. The files were derived from bulk RNA-seq data generated in our study investigating transcriptional readthrough and its impact on neighboring gene regulation during mouse embryonic heart development. These subset BAMs were extracted to facilitate targeted visualization and analysis of splicing junctions, fusion transcripts (Atf4-Cacna1i), and local transcriptional dynamics in this region. Full RNA-seq datasets associated with this study are available in NCBI Gene Expression Omnibus (GEO): GSE303780: RNA-seq of Atf4 exon 3 frameshift knockout embryonic mouse hearts (secure token: wxixogyepdyxvcl) GSE303775: RNA-seq of Rps19bp1 cKO (Xmlc2-Cre) E11.5 mouse hearts (secure token: wvalgaggljchhov) Keywords: RNA-seq; BAM files; Atf4; Rps19bp1; transcriptional readthrough; mouse embryonic heart development; p53 pathway

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Zenodo
创建时间:
2025-07-28
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