A first version of sysBio, an open source package for modeling and simulation of biological systems. It provides ability to convert reactions into ordinary differential equations (ODEs) and ability to
An approach combining genetic, proteomic, computational, and physiological analysis was used to define a protein network that regulates fat storage in budding yeast (Saccharomyces cerevisiae). A compu
The epithelial-mesenchymal transition (EMT) is a cellular process critical for wound healing, cancer metastasis and embryonic development. Recent efforts have identified the role of hybrid epithelial/
For reactions, the values listed are for microscopic rate constants. For second-order reactions, the corresponding λ values can be calculated from Eqs 2 or 26, depending on the type of reaction. The p
