NewHybrids_v.1_input_file
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This is the input file for NewHybrids v1 (Anderson & Thompson 2002; Anderson 2008) analyses, used to identify pure species and hybrids and to classify hybrids into categories (i.e., F1, F2, backcross with M. galloprovincialis, or backcross with M. trossulus). This file includes only diagnostic SNPs. We used Jeffreys-type priors and a burn in of 10,000 sweeps followed by 50,000 sweeps in five separate runs. Convergence of Q across runs were again checked.
本文件为NewHybrids v1(Anderson & Thompson 2002; Anderson 2008)分析的输入文件,用于鉴定纯种物种与杂交个体,并将杂交个体划分为F1、F2、与M. galloprovincialis回交、与M. trossulus回交等类别。本文件仅包含诊断性单核苷酸多态性(Single Nucleotide Polymorphism, SNP)位点。本次分析采用杰弗里斯型先验分布,设置10000次迭代扫描作为预烧期,随后开展5次独立运行,每次运行均包含50000次抽样迭代。各次运行的Q值收敛性均再次进行了检验。
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2015-07-31
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