Transcriptome - Sphaerothecum destruens (rosette agent)
收藏NIAID Data Ecosystem2026-03-10 收录
下载链接：
https://figshare.com/articles/dataset/Transcriptome_-_Sphaerothecum_destruens_rosette_agent_/5446489
下载链接
链接失效反馈官方服务：
资源简介：
Reads are deposited in NCBI: https://www.ncbi.nlm.nih.gov/sra/SRX737879
Assembly in-home BGI to obtain Unigene (contigs)- ORF prediction using TransDecoder (Trinity plugin) and PfamScan to obtain coding sequences (CDS files) from transcripts (mRNA)- Protein translations are included (pep)
- clean.fasta: Assembly cleaned from cross-contamination of other
species multiplexed (Corallochytrium limacisporum India, Ichthyophonus
hoferi and Nutomonas longa) after applying CroCo V0.1.1 (Simion et al. in prep). It may contain bacterial contamination.
Guifré Torruella, Alex de Mendoza, Xavier Grau-Bové, Meritxell Antó, Mark A. Chaplin, Javier del Campo, Laura
Eme, Gregorio Pérez-Cordón, Christopher M. Whipps, Krista M. Nichols,
Richard Paley, Andrew J. Roger, Ariadna Sitjà-Bobadilla, Stuart
Donachie, and Iñaki Ruiz-Trillo. (2015)
Phylogenomics reveals convergent evolution of lifestyles in close relatives of animals and fungi.
Current Biology 25(18):2404-10.
www.multicellgenome.com
创建时间：
2017-09-27
