spotless-benchmark-datasets

In <strong>standards.tar.gz</strong>, the silver standards are formatted as silver_standard_<strong>i</strong>-<strong>j</strong>, where <strong>i </strong>refers to the originating single-cell dataset and j refers to the <em>synthspot</em> abundance pattern. Each directory of the silver standard contains 10 replicates. <strong>i</strong> <strong>single-cell dataset</strong> <strong>j</strong> <strong>synthvisium dataset type</strong> 1 brain cortex 1 artificial_uniform_distinct 2 single-cell cerebellum 2 artificial_diverse_distinct 3 single-nucleus cerebellum 3 artificial_uniform_overlap 4 hippocampus 4 artificial_diverse_overlap 5 kidney 5 artificial_dominant_celltype_diverse 6 scc_p5 6 artificial_partially_dominant_celltype_diverse 7 artificial_dominant_rare_celltype_diverse 8 artificial_regional_rare_celltype_diverse 9 artificial_missing_celltypes_visium All reference datasets are in the 'reference/' folder. To use <strong>liver_dataset.tar.gz, </strong>please read liver_README.txt before proceeding.