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Neural network potentials for the phosphoester bond formation between phosphate and methanol in water

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Zenodo2024-05-15 更新2026-05-26 收录
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Neural Network Potentials for H2PO4 and HPO4, as well as the training sets used to train them. The energies are in eV, the forces in eV/angstrom, the xyz coordinates in angstrom, and the box size in angstrom. For H2PO4: Number of structures = 386457 - coord_H2PO4.npy: npy array containing the xyz coordinates. Array size = (number of structures, number of atoms * 3) - box_H2PO4.npy: npy array containing the box sizes. Array size = (number of structures, 9) - force_H2PO4.npy: npy array containing the atomic forces. Array size = (number of structures, number of atoms * 3) - energy_H2PO4.npy: npy array containing the full box potential energy. Array size = (number of structures) - graph_1_000_compressed_H2PO4.pb: neural network potential to propagate trajectories. The nomenclature is the same for HPO4. Number of structures = 227881

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Zenodo
创建时间:
2024-05-06
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