FP_metagene.txt.gz

Dynamics of ribosome scanning and recycling revealed by translation complex profiling. Dataset contains alignment information of RNA-seq reads produced in TCP-seq in yeast, mapped to a reference consisting of spliced transcript sequences (SacCer2) plus up to 1000nt flanking sequence.<br><br>Description of column headers:<br>gene: The gene to whose transcript the read was mapped. read: Unique read identifier (some reads mapped more than once)<br>start: The start position of the read relative to the gene's annotated start codon ('A' in AUG set to zero; all coordinates are inclusive of the end-nucleotides in the FPs) <br>min_end: The 5'-most possible position of the RNA fragment's 3' end. In cases of an ambiguity caused by the end falling on an oligo-A tract, this will be less than max_end. <br>max_end: The 3'-most possible position of the RNA fragment's 3' end. In cases of an ambiguity caused by the end falling on an oligo-A tract, this will be greater than min_end. sample: The sample / fraction from which the library was generated.<br>