SPAD-CFR: Trained Model Weights and Preprocessed Datasets

This repository contains trained model weights and preprocessed datasets for SPAD-CFR (Spatial Point-cloud Attention-based Diffusion for CounterFactual Reprogramming), as described in the manuscript "Counterfactual diffusion modeling enables spatially targeted reprogramming of tissue microenvironments". Contents:- Trained model weights for four datasets (*.ckpt)- Preprocessed spatial datasets (*.tar.gz): - IMC breast cancer Basel cohort - IMC breast cancer Zurich cohort - IMC melanoma cohort - MERFISH mouse primary motor cortex