Number of significant genes (and expected number) under different filters.
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Note: These analyses are restricted to the genes that have more than 15 minor alleles in the samples used in each study. MAC columns show the number of minor alleles called per sample, Ba: Baylor, Br: Broad. Filter PASS includes all variants that score a “Pass” based on GATK, Filter MISS: missingness , Filter DpBal: missingness , depth balance for Baylor, for Broad.
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2015-12-02



