Fast prediction of protein flexibility: Graphlet Degree Vector linear model
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Lightweight, fast, and purely coordinate-based GDV linear model predicts protein flexibility.It can be applied in near real time (on the order of 10 seconds) even forlarge proteins with 20,000 atoms on a standard desktop or laptop. Code: https://github.com/jure-praznikar/FastProtFlex bioRxiv(preprint): https://www.biorxiv.org/content/10.64898/2025.11.30.691417v1 (Beta) FastProtFlex Server: https://taru.iam.upr.si/fastprotflex Published: https://doi.org/10.1093/bioinformatics/btag175 Required R libraries: library(igraph)library(bio3d)library(pdist)library(netdist)
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2025-11-30



