five

Single nucleus methylation data from eight inbred mouse strains

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NIAID Data Ecosystem2026-05-01 收录
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https://figshare.com/articles/dataset/Single_nucleus_methylation_data_from_eight_inbred_mouse_strains/23632044
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Data from each strain for each cell type was combined from pseudobulk files to create these gzipped text files.  The following pieces of information were included for each :      chr Chromosome    pos bp position     aj.mc Methylated reads A/J    aj.cov Total reads A/J    b6.mc Methylated reads C57BL/6J    b6.cov Total reads C57BL/6J    balb.mc Methylated reads BALB/cJ    balb.cov Total reads BALB/cJ    cast.mc Methylated reads CAST/EiJ     cast.cov Total reads CAST/EiJ     d2.mc Methylated reads DBA/2J    d2.cov Total reads DBA/2J    fvb.mc Methylated reads FVB/J    fvb.cov Total reads FVB/J    pwk.mc Methylated reads PWK/PhJ    pwk.cov Total reads PWK/PhJ    wsb.mc Methylated reads WSB/EiJ    wsb.cov Total reads WSB/EiJ    strand Strand     type CG or CH     total.mc Total methylated reads for all strains    total.cov Total coverage over all strains    fraction.mc Fraction of methylated reads    n.strains Number of strains for which data were available    var.pos Postion of variants with respect to the position of the methylated site    var.sdp Strain distribution pattern of  sequence variation
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2023-10-25
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