Table S1 - Analysis of Myc-Induced Histone Modifications on Target Chromatin

Genomic coordinates, PCR primers and qChIP data. The columns are defined by the following headings: Amplicon#: Each PCR amplicons is identified by the reference number of its 5�� primer in our laboratory database. X-axis Fig. 1�C6: Numbering of each locus/amplicon on the X-axis of all bar-graphs in figures 1�C6. These numbers correspond to increasing Myc binding, determined by the qChIP values in column Myc (?tet). Order Fig. 8: The number indicated the order of appearance of each locus in the clustering analysis of Fig. 8. Chr, Start, End: chromosomal coordinates of each PCR amplicon. Forward, Reverse: sequences of the corresponding PCR primers. Amplicon Seq, Length: sequence and length of each amplicon. Gene: name of the gene. For bi-directional promoters, the two genes are named. mRNA: Variation in mRNA levels for each gene. For bi-directional promoters, the data refer to the first gene listed. Data are represented as the ratio of mRNA levels in the two experimental conditions (?/+tet) normalized to 18S levels. ND: mRNA not detected (in either ?tet or +tet). na: mRNA not addressed. All other columns: The numbers show qChIP data (expressed as % of input chromatin) for each protein or histone mark analyzed (indicated in the heading) with or without tetracylin (+tet, ?tet). (0.27 MB XLS)