Manual nuclei segmentations in near-isotropic, reconstructed volume electron microscopy (FIB-SEM) of Interphase COS-7 cell (jrc_cos7-1b)
收藏DataCite Commons2025-06-04 更新2025-04-16 收录
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https://janelia.figshare.com/articles/dataset/Manual_nuclei_segmentations_in_near-isotropic_reconstructed_volume_electron_microscopy_FIB-SEM_of_Interphase_COS-7_cell_jrc_cos7-1b_/26512297
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<b>Annotation description</b>: Dense segmentations of nuclei in jrc_cos7-1b using Amira-Avizo (Thermo Fisher Scientific) and "Using Amira to manually segment organelles in vEM for machine learning V.3" protocol.<b>Annotation protocol</b>: Using Amira to manually segment organelles in vEM for machine learning V.3 (http://dx.doi.org/10.17504/protocols.io.bp2l61rb5vqe/v3)<b>Software</b>: Amira 3D 2021.1, Classic Segmentation Workroom<b>Classes annotated</b>: Nuclei<b>Source (EM) dataset ID</b>: jrc_cos7-1b<b>Source (EM) voxel size (nm)</b>: 2 x 2 x 2 (X, Y, Z)<b>Source (EM) data dimensions (µm)</b>: 40.69 x 9.05 x 2.23 (x, y, z)<b>Source (EM) DOI</b>: https://doi.org/10.25378/janelia.26512297<b>Dataset URL</b>: s3://janelia-cosem-datasets/jrc_cos7-1b/jrc_cos7-1b.zarr/recon-2/labels/inference/segmentations/nuc/<b>Visualization website</b>: https://openorganelle.janelia.org/datasets/jrc_cos7-1b
提供机构:
Janelia Research Campus
创建时间:
2024-08-07



