Shine Dalgarno strength data for manuscript "Occlusion of the anti-Shine-Dalgarno on the 30S platform reduces the efficiency of prfB programmed frameshifting in Flavobacterium johnsoniae"

This data set contains Shine Dalgarno strengths for every gene in 4362 bacterial genomes that were analyzed in the manuscript titled "Analysis of programmed frameshifting during translation of prfB in Flavobacterium johnsoniae". There is one comma separated file per genome. They are split between six zip archives. Each line in these files represents one gene. The columns are the genome ID, the name of the gene, the SD strength in kcal/mol as determined by free_scan, the mock SD strength in kcal/mol as determined by free_scan, the anti Shine Dalgarno sequence identified from the 16S ribosomal RNAs of the organism, the sequence of the SD region that was scanned, and the sequence of the mock SD region that was scanned. The mock SD region is further upstream of the gene and should not contain a true SD sequence and is provided as a control.