Additional file 6 of Notos - a galaxy tool to analyze CpN observed expected ratios for inferring DNA methylation types

CpG o/e ratios from dbEST analyzed by Notos: mode detection output - bootstrap statistics. The optional bootstrap procedure of the density estimation step of Notos carried out for 603 species from dbEST provides the tab-separated file ‘modes_bootstrap.csv’. In the following we provide brief explanation on the content of the columns of this file. Future improvements of Notos may lead to changes, thus consult the the readme section of the galaxy interface. • Name: name of the file analyzed • Number of modes (NM): number of modes detected for the original sample • % of samples with same NM: proportion of bootstrap samples with the same number of modes (0 - 100) • % of samples with more NM: proportion of bootstrap samples a higher number of modes (0 - 100) • % of samples with less NM: proportion of bootstrap samples a lower number of modes (0 - 100) • no. of samples with same NM: number of bootstrap samples with the same number of modes • % BS samples excluded by prob. mass crit.: proportion of bootstrap samples excluded due to strong deviations from the probability masses determined for the original sample (0 - 100) (CSV 29.8 kb)