Phylogenetic conflict, hybridization, and divergence history during rapid radiation in Clematis: Evidence from transcriptomic data

This package contains processed phylogenomic datasets, tree files, analysis inputs and outputs, and custom scripts or command-wrapper scripts used for the manuscript "Phylogenetic conflict, hybridization, and divergence history during rapid radiation in Clematis: Evidence from transcriptomic data". Raw transcriptome reads generated for this study are deposited in NCBI SRA/BioProject and are not duplicated here.