Additional file 6: Table S6. of The link between adjacent codon pairs and mRNA stability

Test for association of codon optimality with mRNA decay rate, protein abundance per mRNA, and ribosome occupancy. (A) Spearman’s correlation and partial correlation coefficients to assess associations between codon optimality and the gene expression variables. P values obtained according to Kim [16] and those based on permutation tests are shown. (B) Same as (A) but for Kendall’s correlation coefficients. (XLSX 44 kb)