Additional file 2: of Helitron distribution in Brassicaceae and whole Genome Helitron density as a character for distinguishing plant species
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Table S1. EAHelitron uniquely predicted Helitrons and polymorphisms loci. Table S2. All Helitron LOCs and nearest TAIR ID of 18 Ath ecotypes with phenotypes. Table S3. False positive rate of Helitron programs (100 random sequences). Table S5. RepHel percent of Helitrons in Brassicaceae. Table S6. Six Brassicaceae genomes Helitron 3’ end upstream 1 kbp sequences homology rate. Table S7. Brassicaceae gene density correlation of Helitron density (window = 1 Mb, step = 500 kb). Table S10. TAIR10 predict Helitron inserted into intron or UTR genes. Table S11. The 216 single rules associated with Flowering-Time types. (XLSX 139 kb)
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2019-06-24



