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TE families enriched for genes up-regulated in response to abiotic stress.

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figshare.com2023-05-31 更新2025-03-26 收录
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https://figshare.com/articles/dataset/_TE_families_enriched_for_genes_up_regulated_in_response_to_abiotic_stress_/1286609/1
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aNumber of expressed genes with a TE insertion within 1 kb from the transcription start site.bPercent of up-regulated genes relative to all expressed genes with a TE insertion. cFold enrichment values (F.E.) for TE families are calculated relative to up-regulated genes among all expressed genes under the same stress condition. dLog2(stress/control) was calculated from aggregated read counts for corresponding TE families and represent the level of stress-induced up-regulation of the TE from a certain family.TE families enriched for genes up-regulated in response to abiotic stress.

表达基因的数量,其中包含转录起始位点1 kb范围内的TE插入;与所有包含TE插入的表达基因相比的上调基因百分比;计算TE家族的富集倍数(F.E.),相对于相同应激条件下所有表达基因中的上调基因;通过对应TE家族的聚合读数计算log2(应激/对照),以代表特定家族TE应激诱导上调的水平。富集于对非生物应激反应而上调的基因的TE家族。
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